Microbiome Research Reports
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Editor-in-Chief: Marco Ventura
Indexing: ESCI, Scopus, PMC, CAS, Lens,
Submission to first decision: 60 days
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Editor-in-Chief: Marco Ventura
Submission to first decision: 60 days
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Microbiome Research Reports

In vitro human gut microbiota fermentation models: opportunities, challenges, and pitfalls

Mode of action of Akkermansia muciniphila in the intestinal dialogue: role of extracellular proteins, metabolites and cell envelope components

Microbial interactions and the homeostasis of the gut microbiome: the role of Bifidobacterium

MEGAnnotator2: a pipeline for the assembly and annotation of microbial genomes

Folate-producing bifidobacteria: metabolism, genetics, and relevance

Articles

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Post-weaning diarrhea caused by F18+ Escherichia coli and its impact on mucosa-associated microbiota and immune responses in the jejunum of nursery pigs

Jeonghyeon Son, ...Sung Woo Kim,
Open Access Review DOI: 10.20517/mrr.2025.14 29 Jul 2025
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Bile salt hydrolase: a key player in gut microbiota and its implications for metabolic dysfunction-associated steatotic liver disease

Weixing Zhao, ...Yan Ni,
Open Access Review DOI: 10.20517/mrr.2025.12 29 Jul 2025
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Profiling the composition of resistome and bacteriome in the upper respiratory tract of domestic cats with respiratory signs in China

Qiuyan Li, ...Zhong Peng,
Open Access Original Article DOI: 10.20517/mrr.2025.04 27 Jul 2025
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Synbiotic modulation of adult gut microbiome by 2′-fucosyllactose and Bifidobacterium longum subsp. infantis EFEL8008

Dong Hyeon Lee, ...Nam Soo Han,
Open Access Original Article DOI: 10.20517/mrr.2025.35 21 Jul 2025
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Probiotic membrane vesicles: emerging tools for disease treatment

Jari Verbunt, ...Frank R. M. Stassen,
Open Access Review DOI: 10.20517/mrr.2025.20 23 Jun 2025
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In vitro human gut microbiota fermentation models: opportunities, challenges, and pitfalls

Julia Isenring, ... Christophe Lacroix
Open Access Review DOI: 10.20517/mrr.2022.15 16 Jan 2023
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Mode of action of Akkermansia muciniphila in the intestinal dialogue: role of extracellular proteins, metabolites and cell envelope components

Anneleen Segers, Willem M. de VosWillem M. de Vos
Open Access Review DOI: 10.20517/mrr.2023.05 12 Mar 2023
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Microbial interactions and the homeostasis of the gut microbiome: the role of Bifidobacterium

Alberto J.M. Martin, ... Daniel Garrido
Open Access Review DOI: 10.20517/mrr.2023.10 9 May 2023
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Themed Collections
bifidobacteria
gut microbiota
microbiome
probiotics
bacteriophage
phages
antibiotics
microbial
infant gut
microbial ecology
intestinal microbiome
host-microbe interactions
intestinal fungi
microbial ecosystems
metagenomics
microbial DNA sequencing
bifidobacterium
genomic
irritable bowel syndrome
Topic: Akkermansia muciniphila and Its Health Benefits: From Associations to Causality
Topic: Exploring the Infant Microbiome: From Birth to Early Growth and Development
Topic: Microbiomes of Arthropods and Their Environments
Volume 4, Issue 3 (in progress)
Volume 4, Issue 2
Volume 4, Issue 1
Volume 3, Issue 4
Volume 3, Issue 3
Volume 3, Issue 2
Volume 3, Issue 1
Volume 2, Issue 4
Volume 2, Issue 3
Volume 2, Issue 2
Volume 2, Issue 1
Volume 1, Issue 4
Volume 1, Issue 3
Volume 1, Issue 2
Volume 1, Issue 1
Articles Collection
Special Issue: Akkermansia muciniphila and Its Health Benefits: From Associations to Causality
Microbiome Research Reports Receives Its First Impact Factor of 3.8
We are delighted to announce that Microbiome Research Reports (MRR) has received its first official Impact Factor of 3.8, as published in the 2025 edition of Clarivate's Journal Citation Reports (JCR) on June 18.
An Exclusive Interview with Prof. Liping Zhao - Fellow of the American Academy of Microbiology
Microbiome Research Reports (MRR) recently had the privilege of speaking with Prof. Liping Zhao, a globally recognized leader in microbiome science and a Fellow of the American Academy of Microbiology.
Microbiome Research Reports Launches the 2nd Recruitment for Early Career Editorial Board Members
We cordially invite outstanding early-career experts and scholars in microbiome research to join us in advancing academic excellence.
Microbiome Research Reports Announces 2024 Best Paper Award – Honoring Excellence in Microbiome Research
The Editorial Office of Microbiome Research Reports (MRR) is pleased to announce that the 2024 Best Paper Award has been granted to the seminal review article "In vitro human gut microbiota fermentation models: opportunities, challenges, and pitfalls" by Prof. Christophe Lacroix et al.
Special Webinar: Brain-Gut-Microbiota Axis: Implications for Psychiatry
On March 24, 2025, Microbiome Research Reports successfully held the webinar on "Brain-Gut-Microbiota Axis: Implications for Psychiatry" presented by Prof. Ted Dinan.

In vitro human gut microbiota fermentation models: opportunities, challenges, and pitfalls

Mode of action of Akkermansia muciniphila in the intestinal dialogue: role of extracellular proteins, metabolites and cell envelope components

Microbial interactions and the homeostasis of the gut microbiome: the role of Bifidobacterium

MEGAnnotator2: a pipeline for the assembly and annotation of microbial genomes

Folate-producing bifidobacteria: metabolism, genetics, and relevance

In vitro human gut microbiota fermentation models: opportunities, challenges, and pitfalls
Julia Isenring, ... Christophe Lacroix
Open Access | Review | 16 Jan 2023
Views: | Downloads:
Download PDF
Mode of action of Akkermansia muciniphila in the intestinal dialogue: role of extracellular proteins, metabolites and cell envelope components
Anneleen Segers, Willem M. de VosWillem M. de Vos
Open Access | Review | 12 Mar 2023
Views: | Downloads:
Download PDF
Microbial interactions and the homeostasis of the gut microbiome: the role of Bifidobacterium
Alberto J.M. Martin, ... Daniel Garrido
Open Access | Review | 9 May 2023
Views: | Downloads:
Download PDF

Coming soon.

Volume 4, Issue 3 (in progress)
Volume 4, Issue 2
Volume 4, Issue 1
Volume 3, Issue 4
Volume 3, Issue 3
Volume 3, Issue 2
Volume 3, Issue 1
Volume 2, Issue 4
Volume 2, Issue 3
Volume 2, Issue 2
Volume 2, Issue 1
Volume 1, Issue 4
Volume 1, Issue 3
Volume 1, Issue 2
Volume 1, Issue 1
Articles Collection
Microbiome Research Reports
ISSN 2771-5965 (Online)
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All published articles are preserved here permanently:

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